yitD [2018-09-14 17:24:17]

putative PSL synthase

locus: BSU10950

pI: 4.38

mw: 28.21 kDa

protein length: 252 aa

gene length: 756 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

Gene

Coordinates: 1,173,333 → 1,174,091

The protein

Structure

• [PDB|1U83]

Expression and Regulation

Operons

• genes: [gene|FA7147930DA90604BE2B4837A8A4393F72498AB1|yitC]-[gene|97156E7227E298B0DECC9AAC1411D0DAF3420C29|yitD]
  description: [Pubmed|22383849]

  sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|15383836], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]
  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|15699190,15383836], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]

  regulation

  • expressed during [SW|sporulation] in the mother cell ([protein|search|SigE], [protein|search|SigK]) [Pubmed|15699190,15383836]

Biological materials

Mutant

• MGNA-B178 (yitD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1177 NBRP B. subtilis, Japan]
• BKE10950 (Δ[gene|97156E7227E298B0DECC9AAC1411D0DAF3420C29|yitD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10950 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGGCAATTCTAGTGAAAAAT, downstream forward: _UP4_TAAAATAGCGGCTGCGGGGC
• BKK10950 (Δ[gene|97156E7227E298B0DECC9AAC1411D0DAF3420C29|yitD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10950 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TGGCAATTCTAGTGAAAAAT, downstream forward: _UP4_TAAAATAGCGGCTGCGGGGC

References

• 15699190,15383836